Shewanella oneidensis

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Species: Shewanella oneidensis

Species code: SHEON

Type: Eubacteria

Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Shewanella (TaxID: 70863) [NEWT / NCBI]

Strain(s): MR-1

Genome: circular, 4.9 Mb; 1 ECE of 161 Kb

Reference(s): MEDLINE=22297686 [NCBI, ExPASy, Israel, Japan]; PubMed=12368813;
Heidelberg J.F., Paulsen I.T., Nelson K.E., Gaidos E.J., Nelson W.C., Read T.D., Eisen J.A., Seshadri R., Ward N., Methe B., Clayton R.A., Meyer T., Tsapin A., Scott J., Beanan M., Brinkac L., Daugherty S., DeBoy R.T., Dodson R.J., Durkin A.S., Haft D.H., Kolonay J.F., Madupu R., Peterson J.D., Umayam L.A., White O., Wolf A.M., Vamathevan J., Weidman J., Impraim M., Lee K., Berry K., Lee C., Mueller J., Khouri H., Gill J., Utterback T.R., McDonald L.A., Feldblyum T.V., Smith H.O., Venter J.C., Nealson K.H., Fraser C.M.;
"Genome sequence of the dissimilatory metal ion-reducing bacterium Shewanella oneidensis.";
Nat. Biotechnol. 20:1118-1123(2002).

Genome official sequence WWW site(s): http://www.tigr.org/tigr-scripts/CMR2/GenomePage3.spl?database=gsp

Other WWW site(s): GIB (DDBJ)
TIGR CMR

Description: Facultative aerobic Gram-negative bacterium. It uses oxygen as the terminal electron acceptor during aerobic respiration; however during anaerobic conditions, S.oneidensis undertakes respiration by reducing alternative terminal electron acceptors such as oxidized metals, fumarate, nitrate etc. Shewanella species can directly reduce both uranium and chromium from the dissolved liquid state. Such abilities could facilitate the removal of dilute metal pollutants in both contained-storage and natural sites. Additionally S.oneidensis can immobilize toxic metals through the formation of insoluble metal sulfides. Finally it has been proposed for bioremediation of anoxic polluted sites. S.oneidensis might prove useful for direct bioremediation of both metal and organic pollutants under anaerobic conditions.

Properties: Number of membranes : 2
Presence of a flagella : Yes
Number of inteins : 0

Genomic Proximity Viewer
Perform a BLAST search against all proteins from Shewanella oneidensis
Download ftp file containing all Swiss-Prot and TrEMBL entries of this organism
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- in FASTA format

Last modified 12-Apr-2003

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Species:	Shewanella oneidensis
Species code:	SHEON
Type:	Eubacteria
Taxonomy:	Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Shewanella (TaxID: 70863) [NEWT / NCBI]
Strain(s):	MR-1
Genome:	circular, 4.9 Mb; 1 ECE of 161 Kb
Reference(s):	MEDLINE=22297686 [NCBI, ExPASy, Israel, Japan]; PubMed=12368813; Heidelberg J.F., Paulsen I.T., Nelson K.E., Gaidos E.J., Nelson W.C., Read T.D., Eisen J.A., Seshadri R., Ward N., Methe B., Clayton R.A., Meyer T., Tsapin A., Scott J., Beanan M., Brinkac L., Daugherty S., DeBoy R.T., Dodson R.J., Durkin A.S., Haft D.H., Kolonay J.F., Madupu R., Peterson J.D., Umayam L.A., White O., Wolf A.M., Vamathevan J., Weidman J., Impraim M., Lee K., Berry K., Lee C., Mueller J., Khouri H., Gill J., Utterback T.R., McDonald L.A., Feldblyum T.V., Smith H.O., Venter J.C., Nealson K.H., Fraser C.M.; "Genome sequence of the dissimilatory metal ion-reducing bacterium Shewanella oneidensis."; Nat. Biotechnol. 20:1118-1123(2002).
Genome official sequence WWW site(s):	http://www.tigr.org/tigr-scripts/CMR2/GenomePage3.spl?database=gsp
Other WWW site(s):	GIB (DDBJ) TIGR CMR
Description:	Facultative aerobic Gram-negative bacterium. It uses oxygen as the terminal electron acceptor during aerobic respiration; however during anaerobic conditions, S.oneidensis undertakes respiration by reducing alternative terminal electron acceptors such as oxidized metals, fumarate, nitrate etc. Shewanella species can directly reduce both uranium and chromium from the dissolved liquid state. Such abilities could facilitate the removal of dilute metal pollutants in both contained-storage and natural sites. Additionally S.oneidensis can immobilize toxic metals through the formation of insoluble metal sulfides. Finally it has been proposed for bioremediation of anoxic polluted sites. S.oneidensis might prove useful for direct bioremediation of both metal and organic pollutants under anaerobic conditions.
Properties:	Number of membranes : 2 Presence of a flagella : Yes Number of inteins : 0