Nuclc. Acids. Res. OUP
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Database Category:  Genomic Databases


ACeDB
C. elegans, S. pombe, and human sequences and genomic information
database   summary

AMmtDB   Lanave C.1, Licciulli F.2, Incampo L.2, Marolla A.2, Attimonelli M.2
Metazoan mitochondrial genes
database   summary

ArkDB
Genome databases for farm and other animals
database   summary

Celera Discovery System
Integrated, web-based discovery platform
database   summary

Comprehensive Microbial Resource
Completed microbial genomes
database   summary

CropNet
Genome mapping in crop plants
database   summary

CyanoBase
Synechocystis sp. genome
database   summary

Dictyostelium Genome Sequencing Project
Dictyostelium genome resources
database   summary

EcoGene
E. coli K-12 sequences
database   summary

EMGlib
Completely-sequenced prokaryotic genomes
database   summary

FlyBase
Drosophila sequences and genomic information
database   summary

Full-Malaria
Full-length cDNA library from erythrocytic-stage Plasmodium falciparum
database   summary

Genew: The Human Gene Nomenclature Database   Wain,H.M., Lush,M., Ducluzeau,F., Povey,S.
Approved symbols for all human genes
database   summary

GOBASE
Organelle genome database
database   summary

GOLD
Information regarding complete and ongoing genome projects
database   summary

HERVd
The human endogenous retroviruses database (HERVd) is maintained at the Ins
database   summary

HIV Sequence Database
HIV RNA sequences
database   summary

HOWDY
HOWDY is an integrated database system for accessing and analyzing human ge
database   summary

Human BAC Ends Database
Non-redundant human BAC end sequences
database   summary

ICB
Identification and classification of bacteria using protein-coding
database   summary

INE   Sakata, K.1, Antonio, B. A.1, Mukai, Y.1, Sakai, Y.2, Makino, K.2, Sasaki, T.1
Integrated database for rice genome analysis and sequencing
database   summary

MagnaportheDB
We have created a federated database for genome studies of Magnaporthe gris
database   summary

MAtDB
MIPS Arabidopsis thaliana Database: an integrated biological knowledge resource based on the first complete plant genome
database   summary

Medicago Genome Initiative (MGI)   Waugh, M.1, Anderson, W.1, Bell, C.2, Inman, J.1, Schilkey, F.1, Sullivan, J.1, May, G.3
Model legume Medicago ESTs, gene expression and proteomic data
database   summary

Mendel Database
Database of plant EST and STS sequences annotated with gene family information
database   summary

MitBASE
Mitochondrial genomes, intra-species variants, and mutants
database   summary

MitoDat
Mitochondrial proteins (predominantly human)
database   summary

MITOMAP
Human mitochondrial genome
database   summary

MitoNuc/MitoAln   Attimonelli, M.1, Catalano, D.1, Gissi, C.2, Grillo, G.3, Licciulli, F.1, Liuni, S.3, Pesole, G.2, Saccone, C.1
Nuclear genes coding for mitochondrial proteins
database   summary

MITOP
Mitochondrial proteins, genes, and diseases
database   summary

Mouse Genome Database (MGD)   Blake, J.A., Eppig, J.T., Richardson, J.E., Bult, C.J., Kadin, J.A., Mouse Genome Database Group
Mouse genetics, genomics, alleles & phenotypes
database   summary

Munich Information Center for Protein Sequences (MIPS)   Mewes, H. W., Warfsmann, J., Kolesov, G., Gueldener, U., Mannhaupt, G., Frishman, D.
Protein and genomic sequences
database   summary

NRSub
Bacillus subtilis genome
database   summary

Oryzabase   Yamazaki, Y.1, Yoshimura, A.3, Nagato, Y.2, Yamakawa, T.1, Kurata, N.4
Rice genetics and genomics
database   summary

PlasmoDB   Bahl, A.1, Brunk, B.2, Coppel, R. L.3, Crabtree, J.2, Diskin, S. J.2, Fraunholz, M. J.1, Grant, G. R.2, Gupta, D.1, Huestis, R. L.3, Kissinger, J. C.1, Labo, P.1, Li, L.1, McWeeney, S. K.2, Milgram, A. J.1, Roos, D. S.1, Schug, J.2, Stoeckert, C. J. Jr.2
Plasmodium genome
database   summary

Proteome BioKnowledge Library   Costanzo, M.C., Arnaud, M.B., Csank, C.J., Hirschman, J.E., Kranz, J.E., Olsen, P., Robertson, L.S., Skrzypek, M.S., Kondu, P., Lengieza, C., Tillberg, M., Garrels, J.I.
Model organism, pathogen and mammalian proteomes
database   summary

Rat Genome Database   Twigger, S.N.1, Lu, J.1, Shimoyama, M.1, Chen, D.1, Pasko, D.1, Long, H.1, Ginster, J.1, Chen, C.1, Nigam, R.1, Kwitek-Black, A.E.2, Eppig, J.T.3, Maltais, L.3, Maglott, D.4, Schuler, G.4, Jacob, H.J.2, Tonellato, P.1
Rat genetic and genomic data
database   summary

RiceGAAS
An automated annotation system and database for rice genome sequence
database   summary

RsGDB
Rhodobacter sphaeroides genome
database   summary

Saccharomyces Genome Database (SGD)
Saccharomyces cerevisiae genome
database   summary

SubtiList   Moszer, I.1, Jones, L.M.2, Moreira, S.1, Fabry, C.1, Danchin, A.3
Bacillus subtilis 168 genome
database   summary

The Arabidopsis Information Resource (TAIR)
Arabidopsis thaliana genome
database   summary

The Phytophthora Genome Consortium Database   Waugh, M.E.1, Tyler, B.M.2, Mitchell, T.3, Houfek, T.D.3, Dean, R.A.3, Anderson, W.T.1, Inman, J.T.1, Schilkey, F.D.1, Sullivan, J.P.1, Bell, C.J.4
ESTs from Phytophthora infestans and Phytophthora sojae
database   summary

TIGR Microbial Database
Microbial genomes and chromosomes
database   summary

Wanda
Comparative genomics has shown that ray-finned fish (Actinopterygii) contai
database   summary

WILMA   Prlic, A., Domingues, F.S., Lackner, P., Sippl, M.J.
C. elegans annotation
database   summary

ZFIN   Sprague, J., Douglas, S., Westerfield, M., The ZFIN GROUP (Clements, D., Conlin, T., Edwards, P., Frazer, K., Schaper, K., Segerdell, E.)
Genetic, genomic, and developmental data from zebrafish
database   summary

ZmDB
Maize genome database
database   summary


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