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HAMAP proteomes: Bacteria

HIGH-QUALITY AUTOMATED AND MANUAL ANNOTATION OF MICROBIAL PROTEOMES
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Proteomes by type: [Summary] BacteriaArchaea Plastids

List of Bacteria proteomes

Swiss-Prot Release 41.4 of 11-Apr-2003: 124464 entries
TrEMBL Release 23.6 of 11-Apr-2003: 828210 entries

This is a list of the organisms in the kingdom Bacteria currently targeted by the HAMAP project. To retrieve an organism's description, genome reference paper(s), taxonomy or a file containing all Swiss-Prot and TrEMBL entries, or to perform a BLAST search against all potential proteins from this organism, click on the species code.

Bacteria
Species code Species Number of
Swiss-Prot entries		 Number of
TrEMBL entries		 Total number of
entries		 Status
AGRT5 Agrobacterium tumefaciens (strain C58 / ATCC 33970) 356 5036 5392
  6%
ANASP Anabaena sp. (strain PCC 7120) 469 5603 6072
  7%
AQUAE Aquifex aeolicus 716 835 1551
  46%
BACHD Bacillus halodurans 498 3510 4008
  12%
BACSU Bacillus subtilis 2365 1734 4099
57%
BIFLO Bifidobacterium longum 38 1684 1722
  2%
BORBU Borrelia burgdorferi (Lyme disease spirochete) 398 853 1251
  31%
BRUME Brucella melitensis 276 2911 3187
  8%
BRUSU Brucella suis 150 3092 3242
  4%
BUCAI Buchnera aphidicola (subsp. Acyrthosiphon pisum) 572 0 572
Complete
BUCAP Buchnera aphidicola (subsp. Schizaphis graminum) 560 0 560
Complete
CAMJE Campylobacter jejuni 320 1293 1613
  19%
CAUCR Caulobacter crescentus 369 3349 3718
  9%
CHLMU Chlamydia muridarum 382 537 919
  41%
CHLPN Chlamydia pneumoniae (Chlamydophila pneumoniae) 389 663 1052
  36%
CHLTE Chlorobium tepidum 199 2047 2246
  8%
CHLTR Chlamydia trachomatis 376 519 895
  42%
CLOAB Clostridium acetobutylicum 363 3485 3848
  9%
CLOPE Clostridium perfringens 296 2426 2722
  10%
COREF Corynebacterium efficiens 77 2865 2942
  2%
CORGL Corynebacterium glutamicum (Brevibacterium flavum) 309 2783 3092
  9%
DEIRA Deinococcus radiodurans 338 2746 3084
  10%
ECOLI Escherichia coli 4226 121 4347
97%
ECOL6 Escherichia coli O6 1001 4331 5332
  18%
ECO57 Escherichia coli O157:H7 1501 3638 5139
  29%
FUSNN Fusobacterium nucleatum (subsp. nucleatum) 192 1858 2050
  9%
HAEIN Haemophilus influenzae 1711 0 1711
Complete
HELPY Helicobacter pylori (Campylobacter pylori) 524 1031 1555
  33%
HELPJ Helicobacter pylori J99 (Campylobacter pylori J99) 520 968 1488
  34%
LACLA Lactococcus lactis (subsp. lactis) (Streptococcus lactis) 384 1840 2224
  17%
LEPIN Leptospira interrogans 77 4611 4688
  1%
LISIN Listeria innocua 360 2657 3017
  11%
LISMO Listeria monocytogenes 362 2483 2845
  12%
MYCLE Mycobacterium leprae 586 1006 1592
  36%
MYCTU Mycobacterium tuberculosis 1367 2510 3877
  35%
MYCGE Mycoplasma genitalium 486 0 486
Complete
MYCPE Mycoplasma penetrans 19 1010 1029
  1%
MYCPN Mycoplasma pneumoniae 687 0 687
Complete
MYCPU Mycoplasma pulmonis 135 643 778
  17%
NEIMA Neisseria meningitidis (serogroup A) 390 1649 2039
  19%
NEIMB Neisseria meningitidis (serogroup B) 386 1580 1966
  19%
OCEIH Oceanobacillus iheyensis 51 3437 3488
  1%
PASMU Pasteurella multocida 486 1529 2015
  24%
PSEAE Pseudomonas aeruginosa 784 4770 5554
  14%
RALSO Ralstonia solanacearum (Pseudomonas solanacearum) 349 4671 5020
  6%
RHILO Rhizobium loti (Mesorhizobium loti) 363 6896 7259
  5%
RHIME Rhizobium meliloti (Sinorhizobium meliloti) 624 5525 6149
  10%
RICCN Rickettsia conorii 264 1110 1374
  19%
RICPR Rickettsia prowazekii 535 299 834
64%
SALTI Salmonella typhi 791 3914 4705
  16%
SALTY Salmonella typhimurium 1220 3312 4532
  26%
SHEON Shewanella oneidensis 70 4510 4580
  1%
STAAM Staphylococcus aureus (strain Mu50 / ATCC 700699) 324 2403 2727
  11%
STAAN Staphylococcus aureus (strain N315) 327 2265 2592
  12%
STAAW Staphylococcus aureus (strain MW2) 304 2355 2659
  11%
STRA3 Streptococcus agalactiae (serotype III) 52 1943 1995
  2%
STRA5 Streptococcus agalactiae (serotype V) 51 2051 2102
  2%
STRCO Streptomyces coelicolor 519 7518 8037
  6%
STAEP Staphylococcus epidermidis 47 2416 2463
  1%
STRMU Streptococcus mutans 134 1816 1950
  6%
STRP3 Streptococcus pyogenes (serotype M3) 235 1595 1830
  12%
STRP8 Streptococcus pyogenes (serotype M18) 241 1596 1837
  13%
STRPN Streptococcus pneumoniae 335 1744 2079
  16%
STRR6 Streptococcus pneumoniae (strain ATCC BAA-255 / R6) 164 1855 2019
  8%
STRPY Streptococcus pyogenes 270 1420 1690
  15%
SYNEL Synechococcus elongatus (Thermosynechococcus elongatus) 93 2358 2451
  3%
SYNY3 Synechocystis sp. (strain PCC 6803) 919 2221 3140
  29%
THEMA Thermotoga maritima 419 1433 1852
  22%
THETN Thermoanaerobacter tengcongensis 263 2284 2547
  10%
TREPA Treponema pallidum 599 430 1029
58%
UREPA Ureaplasma parvum (Ureaplasma urealyticum biotype 1) 209 402 611
  34%
VIBCH Vibrio cholerae 617 3168 3785
  16%
VIBVU Vibrio vulnificus 115 4366 4481
  2%
WIGBR Wigglesworthia brevipalpis 5 606 611
  0%
XANAC Xanthomonas axonopodis (pv. citri) 299 4059 4358
  6%
XANCP Xanthomonas campestris (pv. campestris) 335 3794 4129
  8%
XYLFA Xylella fastidiosa 342 2433 2775
  12%
YERPE Yersinia pestis 543 3356 3899
  13%

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